web TB













WebTB Home → Search

Quick search results Rv0048c     •    Rv or annotation terms Search again

Summary
Functional
Annotation
Consortium
Information
No PDB structure found for Rv0048c
Annotation • External links
• TB Database
• Target explorer link (TAMU Group)
• TBSGC experiment status
GI#15607190 [NCBI] • NP_214562.1
Expasy IPR012551 P71705 [UniProt]

→ FASTA sequence display
Molecular weight30817
Theoretical pI6.85
Total number of negatively charged residues (Asp + Glu)34
Total number of positively charged residues (Arg + Lys)34
Ext. coefficient - ALL Cys32890
Abs 0.1% (=1 g/l) - ALL Cys1.067
Ext. coefficient - NO Cys32890
Abs 0.1% (=1 g/l) - NO Cys1.067
The instability index (II)35.2
Aliphatic index90.83
Grand average of hydropathicity (GRAVY)-0.129
Methionines - Number6
Methionines - Percentage2.04
Cysteins - Number1
Cysteins - Percentage0.34
Typtophans and Tyrosines - Number14
Typtophans and Tyrosines - Percentage4.76
PROSO soluble? [Full results]
• All available PROSO predicted soluble TB proteins		No, 76.2% confidence
• No PDB structure found




 
Genome Browser • Complete results
TIGR roles • See full list at genome browser • full description here • Main roles are underlined while more specific roles are listed below each
Unclassified
Role category not yet assigned 		Energy metabolism
Pentose phosphate pathway 		Regulatory functions
DNA interactions 		Amino acid biosynthesis
Other 		Hypothetical proteins
Conserved 		No database match
 Biosynthesis of cofactors, prosthetic groups, and carriers
Thiamine




 
Annotation

cannot do GENR query:SELECT query_accession,query_gi,query_len,id,hit_gi,Hit_len,Hit_def,Hsp_bit_score,Hsp_score,Hsp_evalue,Hsp_identity,Hsp_positive,Hsp_align_len,Hsp_more,Hit_organism,Hsp_gaps,Hit_accession FROM BLAST.nr_blast WHERE query_rv="Rv0048c" LIMIT 5

Merr:Unknown column 'query_accession' in 'field list'

Message: Blast lookup for nr
/Search/bak1_index.php