→No search term provided

This is the page of results for Rv2133c.

Summary Functional Annotation Consortium Information

No PDB structure found for Rv2133c Annotation • External links • TB Database • Target explorer link (TAMU Group) • TBSGC experiment status GI# 15609270 [NCBI] • NP_216649.1 Expasy IPR000601 O06242 [UniProt] → FASTA sequence display Molecular weight 28316.5 Theoretical pI 5.71 Total number of negatively charged residues (Asp + Glu) 29 Total number of positively charged residues (Arg + Lys) 23 Ext. coefficient - ALL Cys 42190 Abs 0.1% (=1 g/l) - ALL Cys 1.49 Ext. coefficient - NO Cys 41940 Abs 0.1% (=1 g/l) - NO Cys 1.481 The instability index (II) 47.03 Aliphatic index 104.27 Grand average of hydropathicity (GRAVY) 0.023 Methionines - Number 5 Methionines - Percentage 1.88 Cysteins - Number 4 Cysteins - Percentage 1.5 Typtophans and Tyrosines - Number 12 Typtophans and Tyrosines - Percentage 4.51 PROSO soluble? [Full results] • All available PROSO predicted soluble TB proteins No, 94.6% confidence Highest status reported by consortium member Expressed Pedro M. Alzari, alzari@pasteur.fr October 12th, 2004 [10:57 AM] , Rv2133c • No PDB structure found   Genome Browser • Complete results TIGR roles • See full list at genome browser • full description here • Main roles are underlined while more specific roles are listed below each No database match Amino acid biosynthesis Other Unclassified Role category not yet assigned Central intermediary metabolism Sulfur metabolism DNA metabolism DNA replication, recombination, and repair Transport and binding proteins Carbohydrates, organic alcohols, and acids Hypothetical proteins Conserved Cellular processes Toxin production and resistance   Annotation Function* Product Operon UNKNOWN *annotations from GenBank See Status and Consortium details: hypothetical protein Rv2133c-Rv2134c all members Rv2133c Rv2134c Notes Rv2133c, (MTCY270.35), len: 262 aa. Conserved hypothetical protein. Function: unknown but equivalent to hypothetical Mycobacterium leprae protein, Q49774. FASTA best: Q49774 B2126_C1_150 (262 aa) opt: 1447, E(): 0; (79.0% identity in 262 aa overlap) BLAST BLAST results (August, 2009) • [All Blast results] vs. NCBI nr [Complete results] Hit Annotation Evalue Bit Score %Iden %pos 1 gi|134150452|gb|EBA42497.1 conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] ... [Alignment] [More Info] 1.16361e-130 469.544 87.0 (228/262) 87.4 (229/262) 2 gi|183176438|gb|ACC41548.1 hypothetical protein MMAR_3113 [Mycobacterium marinum M] ... [Alignment] [More Info] 5.08263e-110 400.979 72.5 (190/262) 80.9 (212/262) 3 Mycobacterium kansasii ATCC 12478 hypothetical protein MkanA1_19011 [Mycobacterium kansasii ATCC 1 2478] ... [Alignment] [More Info] 3.29446e-109 398.282 71.4 (187/262) 81.3 (213/262) 4 gi|41396330|gb|AAS04195.1 hypothetical protein MAP1878c [Mycobacterium avium subsp. paratuberculosis K-10] ... [Alignment] [More Info] 4.3027e-109 397.897 71.3 (194/272) 76.5 (208/272) vs. NCBI PDBAA [Complete results] Hit Annotation Evalue Bit Score %Iden %pos 1 1GG4 • 12084404 Chain A, Crystal Structure Of Escherichia Coli Udpmurnac-Tripeptide D-Alanyl-D-Alanine-Adding Enzyme (Murf) At 2.3 Angstrom Resolution &(none)... [Alignment] 0.523312 30.8018 37.7 (23/61) 49.2 (30/61) 2 4DMR • 157836936 Chain A, Reduced Dmso Reductase From Rhodobacter Capsulatus With Bound Dmso Substrate (none)... [Alignment] 2.59717 28.4906 44.7 (21/47) 53.2 (25/47) 3 1E5V • 10120735 Chain A, Oxidized Dmso Reductase Exposed To Hepes Buffer &(none)... [Alignment] 2.59717 28.4906 44.7 (21/47) 53.2 (25/47) 4 1DMS • 157830845 Chain A, Structure Of Dmso Reductase (none)... [Alignment] 2.59717 28.4906 44.7 (21/47) 53.2 (25/47) 5 1E60 • 10120737 Chain A, Oxidized Dmso Reductase Exposed To Hepes-Structure Ii Buffer &(none)... [Alignment] 2.59717 28.4906 44.7 (21/47) 53.2 (25/47)   External Services and Databases Prosite PRINTS ProDom PFAM Interpro Target explorer link (TAMU Group) TMHMM Blocks FFAS PHYRE Tuberculist KEGG No KEGG pathway info Mouse over a service name to see a description   Progress information and status No consortium member has worked on this ORF [Edit my Targets] • [See all targets]