YES - soluble or NO - insoluble.
Additionally the probability of a class (from 0.5 to 1.0) is provided.
The probability threshold value is set by default to 0.5. By increasing it one can expect higher classification precision (selectivity) and lower recall (sensitivity) (more details in Method Description).
If the result cannot be calculated, a comment is written.
| Prot. name | Prot. seq. | Result: Class; Class probability |
|---|---|---|
| Rv3117 | MARCDVL... | no; 0.679 |
| Rv3118 | MCSGPKQ... | yes; 0.622 |
| Rv3119 | MANVVAE... | yes; 0.596 |
| Rv3120 | MSPSPSA... | yes; 0.622 |
| Rv3121 | MTSTSIP... | no; 0.955 |
If you use this server, please cite:
Smialowski P, Martin-Galiano AJ, Mikolajka A, Girschick T, Holak TA and Frishman D. Protein solubility: sequence based prediction and experimental verification. Bioinformatics. 2006 Dec 6; [Epub ahead of print]
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Last modified Apr 04, 2006