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This is the page of results for Rv2133c.

Summary Genomic Information Proteomic Information Functional Annotation Consortium Information Homologous Sequences Motifs and Domains Database Crossreferences

No PDB structure found for Rv2133c Annotation • External links • TB Database • Target explorer link (TAMU Group) • TBSGC experiment status GI# 15609270 [NCBI] • NP_216649.1 Expasy IPR000601 O06242 [UniProt] → FASTA sequence display Molecular weight 28316.5 Theoretical pI 5.71 Total number of negatively charged residues (Asp + Glu) 29 Total number of positively charged residues (Arg + Lys) 23 Ext. coefficient - ALL Cys 42190 Abs 0.1% (=1 g/l) - ALL Cys 1.49 Ext. coefficient - NO Cys 41940 Abs 0.1% (=1 g/l) - NO Cys 1.481 The instability index (II) 47.03 Aliphatic index 104.27 Grand average of hydropathicity (GRAVY) 0.023 Methionines - Number 5 Methionines - Percentage 1.88 Cysteins - Number 4 Cysteins - Percentage 1.5 Typtophans and Tyrosines - Number 12 Typtophans and Tyrosines - Percentage 4.51 PROSO soluble? [Full results] • All available PROSO predicted soluble TB proteins No, 94.6% confidence Highest status reported by consortium member Expressed (0 3) Pedro M. Alzari, alzari@pasteur.fr October 12th, 2004 [10:57 AM] , Rv2133c • No PDB structure found   Genome Browser • Complete results TIGR roles • See full list at genome browser • full description here • Main roles are underlined while more specific roles are list below each No database match Amino acid biosynthesis Other Unclassified Role category not yet assigned Central intermediary metabolism Sulfur metabolism DNA metabolism DNA replication, recombination, and repair Transport and binding proteins Carbohydrates, organic alcohols, and acids Hypothetical proteins Conserved Cellular processes Toxin production and resistance   Annotation Function* Product Operon UNKNOWN *annotations from GenBank See Status and Consortium details: hypothetical protein Rv2133c-Rv2134c all members Rv2133c Rv2134c Notes Rv2133c, (MTCY270.35), len: 262 aa. Conserved hypothetical protein. Function: unknown but equivalent to hypothetical Mycobacterium leprae protein, Q49774. FASTA best: Q49774 B2126_C1_150 (262 aa) opt: 1447, E(): 0; (79.0% identity in 262 aa overlap) BLAST BLAST results (July, 2008) • [All Blast results] vs. NCBI nr [Complete results] Hit Annotation Evalue Bit Score %Iden %pos 1 gi|134150452|gb|EBA42497.1 hypothetical protein MtubC_01001969 [Mycobacterium tuberculosis C] ... [Alignment] [More Info] 7.40696e-131 469.544 87.0 (228/262) 87.4 (229/262) 2 gi|41396330|gb|AAS04195.1 hypothetical protein MAP1878c [Mycobacterium avium subsp. paratuberculosis K-10] ... [Alignment] [More Info] 2.73888e-109 397.897 71.3 (194/272) 76.5 (208/272) 3 gi|118163905|gb|ABK64802.1 hypothetical protein MAV_2359 [Mycobacterium avium 104] ... [Alignment] [More Info] 1.04077e-108 395.971 71.0 (193/272) 76.5 (208/272) 4 gi|118569976|gb|ABL04727.1 hypothetical protein MUL_2363 [Mycobacterium ulcerans Agy99] ... [Alignment] [More Info] 1.35929e-108 395.586 72.0 (188/261) 80.5 (210/261) vs. NCBI PDBAA [Complete results] Hit Annotation Evalue Bit Score %Iden %pos 1 • 1GG4 Chain A, Crystal Structure Of Escherichia Coli Udpmurnac-Tripeptide D-Alanyl-D-Alanine-Adding Enzyme (Murf) At 2.3 Angstrom Resolution &(Chain A, Crystal Structure Of Escherichia Coli Udpmurnac-Tripeptide D-Alanyl-D-Alanine-Adding Enzyme (Murf) At 2.3 Angst)... [Alignment] 0.417545 30.8018 37.7 (23/61) 49.2 (30/61) 2 • 4DMR Chain A, Reduced Dmso Reductase From Rhodobacter Capsulatus With Bound Dmso Substrate (Chain A, Reduced Dmso Reductase From Rhodobacter Capsulatus With Bound Dmso Substrate)... [Alignment] 2.07225 28.4906 44.7 (21/47) 53.2 (25/47) 3 • 1E5V Chain A, Oxidized Dmso Reductase Exposed To Hepes Buffer &(Chain A, Oxidized Dmso Reductase Exposed To Hepes Buffer)... [Alignment] 2.07225 28.4906 44.7 (21/47) 53.2 (25/47) 4 • 1DMS Chain A, Structure Of Dmso Reductase (Chain A, Structure Of Dmso Reductase)... [Alignment] 2.07225 28.4906 44.7 (21/47) 53.2 (25/47) 5 • 1E60 Chain A, Oxidized Dmso Reductase Exposed To Hepes-Structure Ii Buffer &(Chain A, Oxidized Dmso Reductase Exposed To Hepes-Structure Ii Buffer)... [Alignment] 2.07225 28.4906 44.7 (21/47) 53.2 (25/47) vs. 1033 genomes [Complete results] Hit Annotation Evalue Bit Score %Iden %pos 1 gi|148823342|ref|YP_001288096.1 hypothetical protein TBFG_12163 [Mycobacter... [Alignment] [More Info] 7.74645e-132 471.085 87.4 (229/262) 87.4 (229/262) 2 gi|121638015|ref|YP_978239.1 hypothetical protein BCG_2150c [Mycobacteri... [Alignment] [More Info] 7.74645e-132 471.085 87.4 (229/262) 87.4 (229/262) 3 gi|15841624|ref|NP_336661.1 hypothetical protein MT2191 [Mycobacterium ... [Alignment] [More Info] 7.74645e-132 471.085 87.4 (229/262) 87.4 (229/262) 4 gi|31793313|ref|NP_855806.1 hypothetical protein Mb2157c [Mycobacterium... [Alignment] [More Info] 7.74645e-132 471.085 87.4 (229/262) 87.4 (229/262) 5 gi|148661948|ref|YP_001283471.1 hypothetical protein MRA_2147 [Mycobacteriu... [Alignment] [More Info] 7.74645e-132 471.085 87.4 (229/262) 87.4 (229/262)   External Services and Databases Prosite PRINTS ProDom PFAM Interpro Target explorer link (TAMU Group) TMHMM Blocks FFAS PHYRE Tuberculist KEGG No KEGG pathway info Mouse over a service name to see a description   Progress information and status Current status Member Name Cloned? Expressed? Purified? Knocked out? Crystallized? PDB? Virtual Screening? Expressed Pedro M. Alzari Rv2133c Last modified: October 12th, 2004 [10:57 AM] Expressed Pedro M. Alzari Rv2133c Last modified: October 12th, 2004 [10:57 AM] [Edit my Targets] • [See all targets]